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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12175939_12178252_F

Intron Information:

Intron Rank:

129678

Intron Class:

major

Intron Phase:

Intron Coordinates:

12175939 - 12178252

Intron Length:

2314

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCCAA

5'SS Class:

major

3'SS Sequence:

TATCTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CATACCTTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

61.1

41.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

0.9

0.7

88.5

28.2

Minor 5ss

30.3

-2.2

3.2

37.4

47.3

Minor BPS

72.5

0.7

1.3

73.37

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023496

12175467 - 12178764

3298