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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12287944_12293494_F

Intron Information:

Intron Rank:

135460

Intron Class:

major

Intron Phase:

Intron Coordinates:

12287944 - 12293494

Intron Length:

5551

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATAAC

U12 Branch Point Sequence:

TCAGTCATAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

80.1

28.4

Major BPS

65.3

0.38

1.1

66.2

36.5

Major PPT

92.3

0.95

0.6

88.4

21.3

Minor 5ss

46.6

-0.3

2.5

60.6

44.5

Minor BPS

56.8

0.29

1.8

73.1

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022877

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033846

12287785 - 12297413

9629