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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12293677_12295012_F

Intron Information:

Intron Rank:

135461

Intron Class:

major

Intron Phase:

Intron Coordinates:

12293677 - 12295012

Intron Length:

1336

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTCAG

5'SS Class:

major

3'SS Sequence:

CTCCCTTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTAAA

U12 Branch Point Sequence:

TGAACCATCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.6

1.1

63.4

42.5

Major BPS

59.8

0.24

1.2

61.9

33.9

Major PPT

80.6

0.69

0.7

72.4

32.3

Minor 5ss

39.7

-1.2

2.8

49.6

46.6

Minor BPS

49.4

0.03

2.1

71.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022877

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033846

12287785 - 12297413

9629