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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12332507_12357140_F

Intron Information:

Intron Rank:

135459

Intron Class:

major

Intron Phase:

Intron Coordinates:

12332507 - 12357140

Intron Length:

24634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

ATCACCTGAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

77.9

30.9

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

100

1.12

0.4

100

Minor 5ss

43.9

-0.7

2.7

58.7

38.8

Minor BPS

55.6

0.15

1.6

64.24

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022877

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021280

12293390 - 12357260

63871