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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12421944_12467352_F

Intron Information:

Intron Rank:

146530

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12421944 - 12467352

Intron Length:

45409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAACACC

5'SS Class:

strong_major

3'SS Sequence:

CCCCTGGACCTAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTCCCCTGGACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

72.1

37.7

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

0.09

0.9

45.4

35.6

Minor 5ss

-1.1

2.9

52.8

44.1

Minor BPS

63.6

0.41

1.5

72.44

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028950

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039216

12386501 - 12467876

81376