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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12621447_12622071_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12621447 - 12622071

Intron Length:

625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTAGC

5'SS Class:

strong_major

3'SS Sequence:

CCCAGTTGTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TAATTCTTAATA

Flanking Amino Acid:

FSEEGERKEIRLIFQKQQLA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

72.2

39.5

Major BPS

100

1.24

0.5

100

Major PPT

66.3

0.37

59.3

40.6

Minor 5ss

29.2

-2.4

2.9

36.2

40.8

Minor BPS

76.7

0.83

1.1

77.14

33.3

Associated Gene:

Gene:

OTOS

Ensembl Gene ID:

ENSAPLG00000000765

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000741

12621397 - 12624427

3031