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Intron Name: Anas_platyrhynchos_platyrhynchos_9_1265815_1272675_R

Intron Information:

Intron Rank:

154339

Intron Class:

major

Intron Phase:

Intron Coordinates:

1265815 - 1272675

Intron Length:

6861

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

TCATTTGTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

77.2

31.1

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

76.3

0.59

0.9

72.5

37.7

Minor 5ss

34.5

-1.8

3.6

51.8

45.1

Minor BPS

47.9

-0.1

60.32

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029337

1255387 - 1273327

17941