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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12670287_12682668_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

12670287 - 12682668

Intron Length:

12382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGAGTACT

5'SS Class:

major

3'SS Sequence:

TTCTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCATAAT

U12 Branch Point Sequence:

TTTTTCTTTCTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

73.5

Major BPS

62.9

0.32

1.2

63.9

38.4

Major PPT

93.2

0.97

0.6

92.2

18.2

Minor 5ss

34.9

-1.7

2.8

44.7

42.7

Minor BPS

-0.2

3.6

83.03

38.5

Associated Gene:

Gene:

ST6GAL1

Ensembl Gene ID:

ENSAPLG00000013571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014142

12670177 - 12694669

24493