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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12678005_12682668_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

12678005 - 12682668

Intron Length:

4664

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCATAAT

U12 Branch Point Sequence:

TTTTTCTTTCTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

84.6

33.2

Major BPS

62.9

0.32

1.2

63.9

38.4

Major PPT

93.2

0.97

0.6

92.2

18.2

Minor 5ss

41.9

-0.9

3.1

59.6

38.8

Minor BPS

-0.2

3.6

83.03

38.5

Associated Gene:

Gene:

ST6GAL1

Ensembl Gene ID:

ENSAPLG00000013571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022667

12677864 - 12694669

16806