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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12682798_12683798_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

12682798 - 12683798

Intron Length:

1001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTATTC

5'SS Class:

major

3'SS Sequence:

TCCTCTCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CGCCCCCTGACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

68.8

37.2

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

0.67

0.7

72.3

32.3

Minor 5ss

41.2

-1

3.4

59.1

45.7

Minor BPS

51.2

0.12

1.8

66.49

43.9

Associated Gene:

Gene:

ST6GAL1

Ensembl Gene ID:

ENSAPLG00000013571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022667

12677864 - 12694669

16806

ENSAPLT00000022297

12666442 - 12694428

27987

ENSAPLT00000014142

12670177 - 12694669

24493