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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12690373_12691436_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12690373 - 12691436

Intron Length:

1064

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TAAATCTGACTT

Flanking Amino Acid:

PAPYHAEIHEWYRKPDYKFF

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

70.8

0.52

70.6

31.6

Major PPT

87.7

0.85

0.8

80.2

37.3

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

47.5

-0.1

1.7

63.42

40.7

Associated Gene:

Gene:

ST6GAL1

Ensembl Gene ID:

ENSAPLG00000013571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022667

12677864 - 12694669

16806

ENSAPLT00000022297

12666442 - 12694428

27987

ENSAPLT00000014142

12670177 - 12694669

24493