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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12728583_12728998_R

Intron Information:

Intron Rank:

133501

Intron Class:

major

Intron Phase:

Intron Coordinates:

12728583 - 12728998

Intron Length:

416

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TTGGTGTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCAGAT

U12 Branch Point Sequence:

TTGCAGATAAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

78.8

38.3

Major BPS

58.9

0.22

1.2

54.7

43.1

Major PPT

71.6

0.49

65.5

Minor 5ss

49.3

-0

2.8

65.3

45.9

Minor BPS

-0.8

2.4

53.67

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019086

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042926

12727361 - 12729174

1814