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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12729708_12733742_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12729708 - 12733742

Intron Length:

4035

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCA|GCAGGAACC

5'SS Class:

weak_major

3'SS Sequence:

ATCCACACATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

GGTCTCATAACA

Flanking Amino Acid:

MGQTMNESNNCS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.8

0.18

1.4

64.6

37.9

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

60.6

0.24

37.7

Minor 5ss

25.2

-2.8

39.1

Minor BPS

57.5

0.23

1.6

67.59

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005572

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005753

12729700 - 12735966

6267