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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12770912_12773308_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12770912 - 12773308

Intron Length:

2397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGGTACCC

5'SS Class:

weak_major

3'SS Sequence:

TGGTTTAGGGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTCCAA

U12 Branch Point Sequence:

ACATTTCCAACC

Flanking Amino Acid:

MSKQHEMTNNSMECD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.6

0.16

1.1

36.9

Major BPS

68.1

0.45

1.3

78.7

34.9

Major PPT

45.9

-0.2

1.8

46.9

Minor 5ss

26.6

-2.7

3.1

31.1

36.3

Minor BPS

45.9

-0.3

1.8

54.03

37.7

Associated Gene:

Gene:

GPR55

Ensembl Gene ID:

ENSAPLG00000001871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001865

12770896 - 12774237

3342