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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12820733_12824181_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12820733 - 12824181

Intron Length:

3449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGCTG

5'SS Class:

major

3'SS Sequence:

ACTGTCATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

TGTGCGTGGAAA

Flanking Amino Acid:

NLWELLVNVKKGTYLPQTYI

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.1

57.8

46.6

Major BPS

72.5

0.56

1.2

39.9

Major PPT

75.1

0.56

0.9

70.7

39.2

Minor 5ss

32.6

-2

3.7

46.8

48.5

Minor BPS

42.6

-0.5

2.3

56.96

42.1

Associated Gene:

Gene:

ITM2C

Ensembl Gene ID:

ENSAPLG00000005414

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026675

12818426 - 12827466

9041

ENSAPLT00000005595

12818426 - 12834759

16334