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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12824293_12824984_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12824293 - 12824984

Intron Length:

692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGGCGC

5'SS Class:

major

3'SS Sequence:

GCTTGGAACACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

AATTCCTTAATC

Flanking Amino Acid:

PADIIHDFQRGLTAYHDITL

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.9

0.4

1.1

52.7

41.3

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

58.5

0.19

1.1

50.3

Minor 5ss

32.4

-2

3.3

38.4

40.7

Minor BPS

83.2

1.02

82.31

30.8

Associated Gene:

Gene:

ITM2C

Ensembl Gene ID:

ENSAPLG00000005414

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026675

12818426 - 12827466

9041

ENSAPLT00000005595

12818426 - 12834759

16334