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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12825189_12827061_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12825189 - 12827061

Intron Length:

1873

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGGTG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCAACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTAAT

U12 Branch Point Sequence:

CTGTCTCCAACC

Flanking Amino Acid:

YVYRYFFITQISSPQLPRES

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

69.5

41.1

Major BPS

0.55

1.2

73.3

39.1

Major PPT

67.3

0.39

60.2

40.7

Minor 5ss

38.9

-1.2

3.6

54.5

49.7

Minor BPS

49.4

-0

1.9

62.98

42.7

Associated Gene:

Gene:

ITM2C

Ensembl Gene ID:

ENSAPLG00000005414

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026675

12818426 - 12827466

9041