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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12852627_12853619_R

Intron Information:

Intron Rank:

146030

Intron Class:

major

Intron Phase:

Intron Coordinates:

12852627 - 12853619

Intron Length:

993

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TTGTCTTTGAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

83.3

29.1

Major BPS

74.6

0.61

1.4

34.5

Major PPT

92.7

0.96

0.6

92.4

17.8

Minor 5ss

-0.6

3.2

62.3

43.4

Minor BPS

0.74

1.4

83.91

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025975

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018177

12852329 - 12859359

7031