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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12853736_12855621_R

Intron Information:

Intron Rank:

146031

Intron Class:

major

Intron Phase:

Intron Coordinates:

12853736 - 12855621

Intron Length:

1886

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

CATTTAGGATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.1

80.2

30.6

Major BPS

58.9

0.22

49.8

35.1

Major PPT

89.1

0.88

0.7

88.2

29.1

Minor 5ss

45.1

-0.5

2.6

58.1

46.5

Minor BPS

37.5

-0.9

2.3

48.95

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025975

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018177

12852329 - 12859359

7031