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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12868489_12869350_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12868489 - 12869350

Intron Length:

862

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGCAA

5'SS Class:

major

3'SS Sequence:

TTTCCACTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

CTTATCTCACCT

Flanking Amino Acid:

NYVTKRQSLKLLGELLLDRH

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

68.2

38.4

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

0.65

0.8

70.8

Minor 5ss

29.4

-2.4

3.3

37.9

46.9

Minor BPS

50.3

0.09

1.9

72.3

44.6

Associated Gene:

Gene:

CAB39

Ensembl Gene ID:

ENSAPLG00000005148

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042127

12865941 - 12903923

37983

ENSAPLT00000005341

12866326 - 12898535

32210