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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12873987_12877894_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12873987 - 12877894

Intron Length:

3908

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

ATGTGTTTAACT

Flanking Amino Acid:

VADLQLIDFEGKKDVAQIFN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.8

33.7

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

0.58

72.7

41.8

Minor 5ss

32.8

-2

2.9

40.7

45.1

Minor BPS

67.6

0.63

1.8

81.85

40.1

Associated Gene:

Gene:

CAB39

Ensembl Gene ID:

ENSAPLG00000005148

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042127

12865941 - 12903923

37983

ENSAPLT00000005341

12866326 - 12898535

32210