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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12878060_12885115_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12878060 - 12885115

Intron Length:

7056

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGTTG

5'SS Class:

strong_major

3'SS Sequence:

CCCTTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

TGTGCTCTATTT

Flanking Amino Acid:

QDISDKKAEKATEEVSKNLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

70.6

42.2

Major BPS

73.9

0.59

30.2

Major PPT

81.2

0.7

80.3

25.2

Minor 5ss

39.3

-1.2

3.5

55.1

49.1

Minor BPS

47.6

-0.1

68.9

42.6

Associated Gene:

Gene:

CAB39

Ensembl Gene ID:

ENSAPLG00000005148

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042127

12865941 - 12903923

37983

ENSAPLT00000005341

12866326 - 12898535

32210