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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12920704_12921185_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12920704 - 12921185

Intron Length:

482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTTGCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAA

U12 Branch Point Sequence:

TCTTCCTTGCCA

Flanking Amino Acid:

KLSSTKEERKLRKPLIERKR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

70.6

37.9

Major BPS

53.2

0.08

1.4

65.6

41.4

Major PPT

78.6

0.64

0.9

72.9

37.4

Minor 5ss

34.1

-1.8

3.1

44.9

43.1

Minor BPS

50.3

3.5

78.22

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005097

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005265

12920500 - 12922751

2252