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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12921512_12922305_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12921512 - 12922305

Intron Length:

794

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTCAATGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

TTCTGTTCAATG

Flanking Amino Acid:

LQNIQNSKLMADSKVGLEAQ

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

35.3

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

72.6

0.51

38.2

Minor 5ss

32.5

-2

3.1

33.3

41.7

Minor BPS

-0.2

58.73

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005097

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005265

12920500 - 12922751

2252