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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12953134_12953229_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12953134 - 12953229

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCGG

5'SS Class:

strong_major

3'SS Sequence:

CGCCCCGGGGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CCGTGCTGACGG

Flanking Amino Acid:

ELRLLLADAELQAKLENAEV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

60.4

45.8

Major BPS

66.3

0.4

1.1

41.8

Major PPT

50.3

0.01

1.1

45.1

36.4

Minor 5ss

24.7

-2.9

29.5

43.3

Minor BPS

36.5

-1.1

2.2

34.86

46.2

Associated Gene:

Gene:

HES6

Ensembl Gene ID:

ENSAPLG00000020110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037758

12952866 - 12953850

985

ENSAPLT00000028577

12952835 - 12953850

1016

ENSAPLT00000017741

12952674 - 12953850

1177