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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12953324_12953416_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12953324 - 12953416

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCCGGGGGG

5'SS Class:

major

3'SS Sequence:

CCCCGGGCCGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCTCCC

U12 Branch Point Sequence:

CTGTCTCTGTCT

Flanking Amino Acid:

LERRSLGEWREGGRLQREAS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.7

0.32

1.2

53.6

40.6

Major BPS

26.6

-1.4

4.1

41.8

Major PPT

56.8

0.15

0.9

48.4

34.1

Minor 5ss

11.9

-4.4

3.6

28.4

Minor BPS

39.5

-0.7

3.5

67.05

44.4

Associated Gene:

Gene:

HES6

Ensembl Gene ID:

ENSAPLG00000020110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037758

12952866 - 12953850

985

ENSAPLT00000028577

12952835 - 12953850

1016

ENSAPLT00000017741

12952674 - 12953850

1177