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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12953668_12953724_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12953668 - 12953724

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCCTCCCCC

5'SS Class:

major

3'SS Sequence:

CCCCAGCGAGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCCTCAG

U12 Branch Point Sequence:

CCTGCCTCAGCG

Flanking Amino Acid:

GSEARGPADETCSDSDEAEA

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.2

0.24

1.3

51.9

43.4

Major BPS

46.3

-0.2

1.6

53.3

44.2

Major PPT

42.3

-0.4

1.6

38.5

33.2

Minor 5ss

35.9

-1.6

3.9

52.2

44.5

Minor BPS

46.6

-0.3

51.08

48.9

Associated Gene:

Gene:

HES6

Ensembl Gene ID:

ENSAPLG00000020110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028577

12952835 - 12953850

1016

ENSAPLT00000017741

12952674 - 12953850

1177