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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12970503_12971463_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12970503 - 12971463

Intron Length:

961

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTTTA

5'SS Class:

major

3'SS Sequence:

TATTTTTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTTCCTTTGACT

Flanking Amino Acid:

GGLPKTVANSECIFCEDNIQ

Intron Amino Acid Position:

1257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

77.4

33.6

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

84.7

0.78

0.7

78.2

Minor 5ss

46.7

-0.3

2.8

68.1

42.7

Minor BPS

80.7

1.05

92.82

28.5

Associated Gene:

Gene:

PER2

Ensembl Gene ID:

ENSAPLG00000004326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043454

12968544 - 13004245

35702

ENSAPLT00000004569

12968544 - 13002211

33668