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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12972652_12973168_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12972652 - 12973168

Intron Length:

517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCCTG

5'SS Class:

major

3'SS Sequence:

ATTATTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTATTTTTAAAG

Flanking Amino Acid:

NGCDMSGSRTGSSETSHTSK

Intron Amino Acid Position:

1142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

1.2

63.6

48.1

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

74.8

0.56

1.1

75.1

38.2

Minor 5ss

-0.3

2.9

64.9

46.4

Minor BPS

66.8

0.39

1.4

68.96

38.4

Associated Gene:

Gene:

PER2

Ensembl Gene ID:

ENSAPLG00000004326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004569

12968544 - 13002211

33668

ENSAPLT00000043454

12968544 - 13004245

35702