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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12973356_12975776_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12973356 - 12975776

Intron Length:

2421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TTCCTATCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTTCCTATCACC

Flanking Amino Acid:

DNCSGKGSLPAESPMDAQNS

Intron Amino Acid Position:

1080

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

75.9

39.9

Major BPS

83.9

0.84

73.9

41.3

Major PPT

73.8

0.54

0.9

67.1

38.2

Minor 5ss

41.5

-0.9

2.8

57.1

41.1

Minor BPS

52.8

0.07

72.69

38.2

Associated Gene:

Gene:

PER2

Ensembl Gene ID:

ENSAPLG00000004326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043454

12968544 - 13004245

35702

ENSAPLT00000004569

12968544 - 13002211

33668