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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12978316_12978568_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12978316 - 12978568

Intron Length:

253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGATTT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTCTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TTTATCATGATT

Flanking Amino Acid:

VGDKKTQPELEMIEDGPSGA

Intron Amino Acid Position:

709

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

83.3

29.2

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

81.5

0.71

0.8

77.3

31.5

Minor 5ss

2.8

73.4

43.4

Minor BPS

59.1

0.37

1.6

80.36

35.3

Associated Gene:

Gene:

PER2

Ensembl Gene ID:

ENSAPLG00000004326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004569

12968544 - 13002211

33668

ENSAPLT00000043454

12968544 - 13004245

35702