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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12978743_12980322_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12978743 - 12980322

Intron Length:

1580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATCTCTA

5'SS Class:

major

3'SS Sequence:

TCTTTTTAAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTCTTTTTAAAT

Flanking Amino Acid:

AAVNAIQPLGGPTVLKASGK

Intron Amino Acid Position:

651

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.2

70.6

41.3

Major BPS

87.3

0.93

0.8

36.5

Major PPT

75.6

0.58

0.9

74.1

34.4

Minor 5ss

49.4

-0

2.5

67.5

43.5

Minor BPS

72.7

0.79

1.3

84.29

36.6

Associated Gene:

Gene:

PER2

Ensembl Gene ID:

ENSAPLG00000004326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043454

12968544 - 13004245

35702

ENSAPLT00000004569

12968544 - 13002211

33668