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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12982375_12982760_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12982375 - 12982760

Intron Length:

386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGCAT

5'SS Class:

major

3'SS Sequence:

TTGTTTTTAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATACAT

U12 Branch Point Sequence:

TTGTTTTTAACA

Flanking Amino Acid:

TEQIYRLLLQPVHNSGSSGY

Intron Amino Acid Position:

484

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

63.1

42.9

Major BPS

74.9

0.62

81.3

29.9

Major PPT

83.7

0.76

0.9

35.4

Minor 5ss

30.7

-2.2

3.6

46.8

48.5

Minor BPS

79.5

0.92

82.37

32.8

Associated Gene:

Gene:

PER2

Ensembl Gene ID:

ENSAPLG00000004326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043454

12968544 - 13004245

35702

ENSAPLT00000004569

12968544 - 13002211

33668