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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12983412_12983909_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12983412 - 12983909

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATGTTGT

5'SS Class:

major

3'SS Sequence:

TCATTCATTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GACTTTTTAAAT

Flanking Amino Acid:

RPLMLAIHKKILQYGGQPFD

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

74.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

79.9

0.67

0.9

74.1

Minor 5ss

49.7

-0

2.4

66.6

38.9

Minor BPS

61.7

0.45

1.4

70.55

40.3

Associated Gene:

Gene:

PER2

Ensembl Gene ID:

ENSAPLG00000004326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043454

12968544 - 13004245

35702

ENSAPLT00000004569

12968544 - 13002211

33668