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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12987169_12988431_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12987169 - 12988431

Intron Length:

1263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGCAG

5'SS Class:

major

3'SS Sequence:

GTTTAATTATTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

CTCTGTTTAATT

Flanking Amino Acid:

MEEKSFFCRISAGKERENEI

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

62.9

43.2

Major BPS

81.8

0.79

1.1

34.5

Major PPT

69.5

0.44

68.1

42.2

Minor 5ss

29.5

-2.4

3.3

37.6

47.1

Minor BPS

0.42

1.8

74.65

43.4

Associated Gene:

Gene:

PER2

Ensembl Gene ID:

ENSAPLG00000004326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043454

12968544 - 13004245

35702

ENSAPLT00000004569

12968544 - 13002211

33668