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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12991907_12992317_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12991907 - 12992317

Intron Length:

411

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCAAG

5'SS Class:

major

3'SS Sequence:

TGTTCTCATGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TGACTATAAACT

Flanking Amino Acid:

YALKSIKQVKANEEYYQLLM

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

70.7

41.1

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

75.2

0.57

0.9

70.8

Minor 5ss

38.8

-1.3

2.8

48.4

47.4

Minor BPS

48.5

-0

1.9

68.22

Associated Gene:

Gene:

PER2

Ensembl Gene ID:

ENSAPLG00000004326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043454

12968544 - 13004245

35702

ENSAPLT00000004569

12968544 - 13002211

33668