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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12992473_12995464_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12992473 - 12995464

Intron Length:

2992

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TTTAATGTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTCTTTAATG

Flanking Amino Acid:

SEHNQSSSGCSSEQSTKAKT

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.1

1.06

0.7

83.2

30.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.4

0.66

72.5

Minor 5ss

33.5

-1.9

2.9

40.7

45.5

Minor BPS

0.71

1.2

74.76

38.2

Associated Gene:

Gene:

PER2

Ensembl Gene ID:

ENSAPLG00000004326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004569

12968544 - 13002211

33668

ENSAPLT00000043454

12968544 - 13004245

35702