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Intron Name: Anas_platyrhynchos_platyrhynchos_9_12995534_12996073_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12995534 - 12996073

Intron Length:

540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTAGTT

5'SS Class:

major

3'SS Sequence:

GTCTTTGTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

GTTACGTTAAGT

Flanking Amino Acid:

MLMESSDCHKSSSSNAFSLM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.1

71.8

38.2

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

76.7

0.6

0.9

69.1

41.8

Minor 5ss

-1.7

3.8

55.8

48.4

Minor BPS

52.9

0.17

2.4

77.46

44.6

Associated Gene:

Gene:

PER2

Ensembl Gene ID:

ENSAPLG00000004326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043454

12968544 - 13004245

35702

ENSAPLT00000004569

12968544 - 13002211

33668