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Intron Name: Anas_platyrhynchos_platyrhynchos_9_13088044_13089587_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13088044 - 13089587

Intron Length:

1544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

GTTGCATATAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TTGCATATAAAG

Flanking Amino Acid:

GKTGNTEKFGRFRQYCEEAY

Intron Amino Acid Position:

977

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

87.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

58.3

0.19

1.2

Minor 5ss

36.7

-1.5

52.2

44.4

Minor BPS

44.8

-0.5

1.9

52.27

41.8

Associated Gene:

Gene:

PIK3CB

Ensembl Gene ID:

ENSAPLG00000003554

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003734

13087257 - 13143501

56245