Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_13122204_13123796_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13122204 - 13123796

Intron Length:

1593

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTACA

5'SS Class:

strong_major

3'SS Sequence:

TCTACTCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAAAT

U12 Branch Point Sequence:

ATCACTTGGACT

Flanking Amino Acid:

DSKIGVLIGKGLHEFDALQD

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

82.6

29.6

Major BPS

69.5

0.48

73.5

28.6

Major PPT

77.9

0.63

0.8

69.8

36.5

Minor 5ss

36.1

-1.6

2.6

Minor BPS

54.9

0.23

1.5

70.74

40.2

Associated Gene:

Gene:

PIK3CB

Ensembl Gene ID:

ENSAPLG00000003554

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003734

13087257 - 13143501

56245