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Intron Name: Anas_platyrhynchos_platyrhynchos_9_13382917_13383166_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13382917 - 13383166

Intron Length:

250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TAAACTCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ACATTTTAAACT

Flanking Amino Acid:

VAFMSYFLQGKLDSCLELLI

Intron Amino Acid Position:

737

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

73.3

0.52

65.6

40.4

Minor 5ss

37.8

-1.4

2.7

46.1

Minor BPS

57.1

0.3

1.6

70.07

41.4

Associated Gene:

Gene:

COPB2

Ensembl Gene ID:

ENSAPLG00000002884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002977

13382839 - 13395101

12263