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Intron Name: Anas_platyrhynchos_platyrhynchos_9_13385160_13385794_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13385160 - 13385794

Intron Length:

635

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACCTCCG

5'SS Class:

major

3'SS Sequence:

TTTTACTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATATATCT

Flanking Amino Acid:

TEDGIEDAFEVLGEIQEIVK

Intron Amino Acid Position:

516

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.2

57.4

47.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

90.1

0.9

0.7

29.3

Minor 5ss

-1.2

51.3

45.1

Minor BPS

53.6

0.19

81.92

39.4

Associated Gene:

Gene:

COPB2

Ensembl Gene ID:

ENSAPLG00000002884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002977

13382839 - 13395101

12263