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Intron Name: Anas_platyrhynchos_platyrhynchos_9_13385939_13386225_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13385939 - 13386225

Intron Length:

287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

GATTTGAATACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TGTTTCTGATTT

Flanking Amino Acid:

VRRIEIQPKHIFWSDSGELV

Intron Amino Acid Position:

468

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

1.2

30.2

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

66.8

0.38

1.1

45.1

Minor 5ss

43.2

-0.7

2.9

57.4

40.7

Minor BPS

58.1

0.33

1.7

77.22

39.5

Associated Gene:

Gene:

COPB2

Ensembl Gene ID:

ENSAPLG00000002884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002977

13382839 - 13395101

12263