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Intron Name: Anas_platyrhynchos_platyrhynchos_9_13386333_13386424_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13386333 - 13386424

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

TTTGTTCCACCT

Flanking Amino Acid:

KSFKPDFGAEGIYGGFLLGV

Intron Amino Acid Position:

432

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.6

12.4

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

89.8

0.89

0.7

84.9

29.9

Minor 5ss

36.2

-1.6

2.9

50.6

45.9

Minor BPS

43.6

-0.4

2.1

67.83

43.5

Associated Gene:

Gene:

COPB2

Ensembl Gene ID:

ENSAPLG00000002884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002977

13382839 - 13395101

12263