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Intron Name: Anas_platyrhynchos_platyrhynchos_9_13386895_13387468_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13386895 - 13387468

Intron Length:

574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAATTAAC

5'SS Class:

major

3'SS Sequence:

TCTCTTGCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TCTCTGACAACT

Flanking Amino Acid:

PQTIQHNPNGRFVVVCGDGE

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

74.6

35.6

Major BPS

87.6

0.93

0.9

89.3

Major PPT

76.8

0.6

0.8

69.5

36.8

Minor 5ss

36.6

-1.5

2.7

46.7

41.8

Minor BPS

42.9

-0.4

2.3

66.17

44.3

Associated Gene:

Gene:

COPB2

Ensembl Gene ID:

ENSAPLG00000002884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002977

13382839 - 13395101

12263