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Intron Name: Anas_platyrhynchos_platyrhynchos_9_13388032_13388166_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13388032 - 13388166

Intron Length:

135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAATTGGA

5'SS Class:

major

3'SS Sequence:

CTTTTTTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGATAAA

U12 Branch Point Sequence:

AGTACATGTATT

Flanking Amino Acid:

LPIIITGSEDGTVRIWHSST

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

65.6

40.4

Major BPS

54.7

0.12

1.2

56.1

37.3

Major PPT

87.3

0.84

0.6

81.3

30.8

Minor 5ss

32.6

-2

3.2

45.3

Minor BPS

-0.3

62.46

41.1

Associated Gene:

Gene:

COPB2

Ensembl Gene ID:

ENSAPLG00000002884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002977

13382839 - 13395101

12263