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Intron Name: Anas_platyrhynchos_platyrhynchos_9_13389500_13390359_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13389500 - 13390359

Intron Length:

860

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGAAT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCTGGGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTGTTTTATTT

Flanking Amino Acid:

ASASLDRTIKVWQLGSSSPN

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

81.1

32.6

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

56.2

0.14

1.2

59.5

35.9

Minor 5ss

33.3

-1.9

3.3

47.8

47.9

Minor BPS

59.9

0.39

1.6

78.46

Associated Gene:

Gene:

COPB2

Ensembl Gene ID:

ENSAPLG00000002884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002977

13382839 - 13395101

12263