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Intron Name: Anas_platyrhynchos_platyrhynchos_9_13391602_13393558_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13391602 - 13393558

Intron Length:

1957

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGCTGT

5'SS Class:

major

3'SS Sequence:

ATCTCTTACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CCTGTTTTAATT

Flanking Amino Acid:

ARKNWVVTGADDMQIRVFNY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.2

43.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.9

0.54

0.9

68.9

35.6

Minor 5ss

48.5

-0.1

2.9

74.5

41.6

Minor BPS

61.1

0.43

1.4

69.97

42.5

Associated Gene:

Gene:

COPB2

Ensembl Gene ID:

ENSAPLG00000002884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002977

13382839 - 13395101

12263