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Intron Name: Anas_platyrhynchos_platyrhynchos_9_13394427_13395098_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13394427 - 13395098

Intron Length:

672

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGCGGGGA

5'SS Class:

major

3'SS Sequence:

TTTTTATCTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATCT

Flanking Amino Acid:

MPLRLDIKRKL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.6

0.39

1.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

85.4

0.8

0.7

78.8

34.8

Minor 5ss

22.2

-3.2

3.4

25.8

39.2

Minor BPS

74.5

0.85

1.5

91.05

32.7

Associated Gene:

Gene:

COPB2

Ensembl Gene ID:

ENSAPLG00000002884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002977

13382839 - 13395101

12263