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Intron Name: Anas_platyrhynchos_platyrhynchos_9_13413550_13415235_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13413550 - 13415235

Intron Length:

1686

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTAATACTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTTTTAATA

Flanking Amino Acid:

HWIEGDQLHLELTCEDQVCH

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

72.2

37.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.5

0.62

0.9

70.4

39.6

Minor 5ss

-2.1

3.6

44.7

44.3

Minor BPS

77.8

0.87

80.84

27.9

Associated Gene:

Gene:

RBP2

Ensembl Gene ID:

ENSAPLG00000002772

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020262

13413496 - 13423579

10084

ENSAPLT00000002804

13413496 - 13427063

13568